Biosystems Data Analysis

Research Posters (2002-2009)

• Similarity measures to infer metabolic networks from metabolome data
  • Tunahan Çakır, Johan Westerhuis, Margriet Hendriks, Age Smilde
  • Benelux Bioinformatics Conference: BBC07. Leuven / BELGIUM (November 12-13, 2007)
• Transcriptional Regulation of Metabolic Fluxes in Response to Carbon Shifts
  • Tunahan Çakır, Betül Kırdar, Z. İlsen Önsan, Kutlu Ö. Ülgen, Jens Nielsen
  • Genomes to Systems 2006. Manchester / UK (March 21-24, 2006)
• Use of Metabolome Data and Metabolic Network Structure to Identify Reaction Significances
  • Tunahan Çakır, Kiran R. Patil, Z. İlsen Önsan, Kutlu Ö. Ülgen, Betül Kırdar, Jens Nielsen
  • 12th European Congress on Biotechnology: ECB-12. Lyngby / DENMARK (August 21-24, 2005)
• Analysis of Enzymopathies in Human Red Blood Cells by Stoichiometric Modeling Methods
  • Saliha Durmuş, Tunahan Çakır, Kutlu Ö. Ülgen
  • 12th European Congress on Biotechnology: ECB-12. Lyngby / DENMARK (August 21-24, 2005)
• Investigation of the Effect of Gene Addition in S. cerevisiae by Metabolic Pathway Analysis
  • Tunahan Çakır, Kutlu Ö. Ülgen, Betül Kırdar
  • 5th International Conference on Systems Biology: ICSB 2004. Heidelberg / GERMANY (October 9-13, 2004)
• Minimal Cut Sets of S. cerevisiae and E. coli Metabolic Networks and Their Structural Robustness
  • Tunahan Çakır, Betül Kırdar, Kutlu Ö. Ülgen
  • 5th International Conference on Systems Biology ICSB 2004. Heidelberg / GERMANY (October 9-13, 2004)
• Control-effective Flux Profiles of Enzyme-Deficient Human Red Blood Cells
  • Tunahan Çakır, Betül Kırdar, Kutlu Ö. Ülgen
  • 5th European Symposium on Biochemical Engineering Science: ESBES-5. Stuttgart / GERMANY (September 8-11, 2004)
• Modeling of Neuron-Astrocyte Coupling via Stoichiometric Modeling Techniques
  • Selma Alsan, Tunahan Çakır, Hale Saybaşılı, Ata Akın, Kutlu Ö. Ülgen
  • 5th European Symposium on Biochemical Engineering Science: ESBES-5. Stuttgart / GERMANY (September 8-11, 2004)
• 'Modeling of Neurotransmitter Glutamate via Metabolic Flux Analysis
  • Selma Alsan, Tunahan Çakır, Hale Saybaşılı, Ata Akın, Kutlu Ö. Ülgen
  • Agora Meeting on Modeling Mental Processes and Disorders. Kusadasi / TURKEY (May 24-29, 2004)
• Stoichiometric Structure of Saccharomyces cerevisiae is Influential in Expression Level Ratios of Metabolic Genes
  • Tunahan Çakır, Betül Kırdar, Kutlu Ö. Ülgen
  • 11th European Congress on Biotechnology: ECB-11. Basel / SWITZERLAND (August 24-29, 2003)
• Investigation of Erythrocyte Enzymopathies by Metabolic Pathway Analysis Techniques
  • Serhan Tacer, Tunahan Çakır, Kutlu Ö. Ülgen
  • 11th European Congress on Biotechnology: ECB-11. Basel / SWITZERLAND (August 24-29, 2003)
• Structured Modeling of Recombinant Yeast Utilizing Starch
  • K. Yalçın Arga, Tunahan Çakır, Pınar Pir, Nevra Özer, M. Mete Altıntaş, Kutlu Ö. Ülgen
  • 3rd Chemical Engineering Conference for Collaborative Research in Eastern Mediterranean : EMCC-3. Thessaloniki / GREECE ( May 13-15, 2003)
• Metabolic Flux Analysis of Recombinant Yeast Utilizing Starch
  • M. Mete Altıntaş, K. Yalçın Arga, Tunahan Çakır, Kutlu Ö. Ülgen
  • 4th European Symposium on Biochemical Engineering Science : ESBES-4. Delft / NETHERLANDS ( August 28-31, 2002)
• Metabolic Flux Distributions in Saccharomyces cerevisiae Utilizing Starch
  • M. Mete Altıntaş, K. Yalçın Arga, Tunahan Çakır, Kutlu Ö. Ülgen
  • 24th Symposium on Biotechnology for Fuels and Chemicals. Gatlinburg-Tennessee / USA (March 31-April 2, 2002)