Oral Presentations
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Genome-scale models of brain metabolism
- 21st Biomedical Engineering National Meeting. Istanbul / TURKEY (November 24-26, 2017) (invited)
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Next-generation Sequencing
- Symposium on Algorithms in Medical Genetics. Ankara / TURKEY (June 3-14, 2017) (invited)
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Next Generation Sequencing in Cancer
- Bioinformatics Forum - 2017. Gebze / TURKEY (May 26, 2017)
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Bioinformatic analysis of transcriptome data to identify metabolic pathways affected from Alzheimer's and Parkinson's Diseases
- 15th National Neuroscience Congress. Sakarya / TURKEY (May 7-10, 2017)
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Systems Biology approaches in cell death: Analysis of genome-scale (omics) data
- Workshop on New Techniques in Cell Death. Gebze / TURKEY (February 9-11, 2017) (invited)
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A novel metabolite-centric computational approach for the identification of perturbed metabolic pathways from transcriptome data
- Seminars of Department of Molecular Biology and Genetics, Bogazici University. Istanbul / TURKEY (May 13, 2016) (invited)
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Hight throughput biological data analysis I: Microarray Data Analysis
- Seminars of Aziz Sancar Institute of Experimental Medicine, Istanbul University. Istanbul / TURKEY (May 2, 2016) (invited)
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Microarrays, Clustering and Classification: Normalization and Differential Expression Gene Detection
- Workshop on Bioinformatics and Applications in Genetics. Istanbul / TURKEY (November 21, 2015) (invited)
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How Cellular Networks Meet Genome Scale Data: Systems Biology Examples
- Department Seminars - Genetics and Bioengineering Department of Yeditepe University. Istanbul / TURKEY (October 26, 2015) (invited)
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A Bioinformatic Approach to the Effect of Brain Tumors on Metabolic Pathways
- Workshop on Cancer and Cancer Stem Cells Control. Manisa / TURKEY (October 8-10, 2015) (invited)
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From Transcriptome data to Protein Interaction Networks: A Systems Biology Example for Arabidopsis thaliana
- Green Biotechnology Workshop. Kocaeli / TURKEY (September 21-23, 2015) (invited)
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Mining biological data: Analysis and interpretation of large-scale 'omics' datasets
- Bioinformatics Methods for Cancer Biology: Theoretical and Practical Workshop. İzmir / TURKEY (September 9-10, 2015) (invited)
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Bioinformatic analysis of apoptotic pathways via transcriptome data
- Bioinformatic Course on Apoptotic Cell Death. İzmir / TURKEY (February 12-13, 2015) (invited)
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2014
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Understanding Brain Metabolic Network Changes in case of Glioblastoma Using Computational Systems Biology Approaches
- International Conference on Applied Informatics for Health and Life Sciences (AIHLS-2014) . Kuşadası / TURKEY (October 19-22, 2014)
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PHISTO: A Web-based Platform For Studying Infection Mechanisms through Pathogen-Human Interactions
- 3rd International Congress of the Molecular Biology Association of Turkey (MolBioKon2014) . Izmir / TURKEY (September 10-12, 2014)
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Bioinformatic Analysis of the Effect of Glioblastoma Tumors on Brain Metabolism
- 11th National Conference of Chemical Engineering. Eskisehir / TURKEY (September 2-5, 2014)
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A Novel Optimization-based Approach for Metabolic Network Inference
- 11th National Conference of Chemical Engineering. Eskisehir / TURKEY (September 2-5, 2014)
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From Systems Biology to Systems Medicine: Foundations and Examples
- International ITU Molecular Biology and Genetics Student Congress ‘14 . Istanbul / TURKEY (August 15-17, 2014) (invited).
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Systems Medicine: A systems-approach for Personalized Medicine
- HIMSS Turkey. Istanbul / TURKEY (June 4-5, 2014) (invited). Download the talk
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Bioinformatic Analysis of the Effect of Neurodegenerative Diseases on Metabolic Pathways
- 12th National Neuroscience Congress. Istanbul / TURKEY (May 28-31, 2014)
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Metabolic Analysis of Parkinson’s and Hungtinton’s Diseases: A Computational Systems Biology Approach
- 9th European Congress on Chemical Engineering(ECC-9) The Hague / HOLLAND (April 21-25, 2013)
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A Database of Human-Pathogen Interactions: PHISTO
- 10th National Conference of Chemical Engineering. Istanbul / TURKEY (September 5, 2012)
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Inference of Metabolic Networks by Computational Analysis of Metabolome Data
- 10th National Conference of Chemical Engineering. Istanbul / TURKEY (September 5, 2012)
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Investigation of Biological Objective of the Cell by Metabolic Flux Analysis Techniques
- 10th National Conference of Chemical Engineering. Istanbul / TURKEY (September 5, 2012)
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Systems Biology: An Emerging Trend in Biotechnology
- University of Isfahan. Isfahan / IRAN (September 14, 2011) (invited)
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Systems Biology: A Science of Networks
- 7th National Biotechnology Congress. Tehran / IRAN (September 12-14, 2011) (invited)
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Computational Systems Biology of Metabolism
- Workshop on Systems Biology- 7th National Biotechnology Congress. Tehran / IRAN (September 11, 2011) (invited)
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Effect of Carbon Source Perturbations on Transcriptional Regulation of Metabolic Fluxes in S. cerevisiae
- 1st International Symposium on Systems Biology. Murcia / SPAIN (June 1-2, 2006)
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Integration of High-throughput Metabolome Data with Metabolic Networks Reveals Perturbation-specific Reporter Reactions
- 13th Istanbul Statistical Physics Days. Istanbul / TURKEY (July 6-8, 2006)
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Optimization of Ethanol Production in Starch-Consuming Recombinant Yeast via Metabolic Pathway Analysis Techniques
- 5th National Chemical Engineering Congress: UKMK5. Ankara / TURKEY (September 2-5, 2002)
2017
2016
2015
2013
2012
2011
2006
2002